STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mmc1_0659KEGG: sat:SYN_01833 HesA/MoeB/ThiF type protein. (306 aa)    
Predicted Functional Partners:
thiG
Thiazole-phosphate synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
  
 
 0.988
Mmc1_0663
PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: sat:SYN_01833 HesA/MoeB/ThiF type protein.
 
      0.899
Mmc1_0658
PFAM: Patatin; KEGG: rfr:Rfer_1852 patatin.
       0.784
Mmc1_1495
Molybdopterin synthase subunit MoaE; TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; molybdopterin biosynthesis MoaE; KEGG: reu:Reut_A1989 molybdopterin biosynthesis MoaE.
  
 0.651
thiC
Hydroxymethylpyrimidine synthase; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction.
  
  
 0.575
Mmc1_0014
KEGG: ccr:CC3223 phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1.
  
  
 0.570
Mmc1_0633
PFAM: thiamine monophosphate synthase; KEGG: tbd:Tbd_0027 NUDIX hydrolase.
  
  
 0.560
thiE
Thiamine-phosphate diphosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.
  
  
 0.560
Mmc1_0660
Hypothetical protein.
       0.554
Mmc1_0661
PFAM: IS66 Orf2 family protein; KEGG: rme:Rmet_1275 IS66 Orf2 like.
       0.554
Your Current Organism:
Magnetococcus marinus
NCBI taxonomy Id: 156889
Other names: M. marinus MC-1, Magnetococcus marinus MC-1, Magnetococcus marinus str. MC-1, Magnetococcus marinus strain MC-1, Magnetococcus sp. MC-1
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