STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mmc1_0705PFAM: Sporulation domain protein; KEGG: rso:RSc0286 hypothetical protein. (372 aa)    
Predicted Functional Partners:
argS
KEGG: jan:Jann_1507 arginyl-tRNA synthetase; TIGRFAM: arginyl-tRNA synthetase.
  
    0.820
Mmc1_0703
Transcriptional regulator, Fis family; PFAM: Phosphoglycerate mutase; KEGG: noc:Noc_1928 phosphoglycerate/bisphosphoglycerate mutase.
  
    0.504
ftsA
Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.
   
 
 0.492
Mmc1_0264
PFAM: Colicin V production protein; KEGG: son:SO3065 colicin V production protein.
  
    0.469
Mmc1_0749
Polypeptide-transport-associated domain protein, FtsQ-type; Essential cell division protein.
   
 
 0.415
Your Current Organism:
Magnetococcus marinus
NCBI taxonomy Id: 156889
Other names: M. marinus MC-1, Magnetococcus marinus MC-1, Magnetococcus marinus str. MC-1, Magnetococcus marinus strain MC-1, Magnetococcus sp. MC-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.