STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mmc1_0734TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: fnu:FN1135 phosphonates-binding protein. (285 aa)    
Predicted Functional Partners:
Mmc1_0735
TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; KEGG: mth:MTH1607 sensory transduction regulatory protein.
       0.773
Mmc1_3105
PFAM: protein of unknown function DUF839; KEGG: rru:Rru_A3006 protein of unknown function DUF839.
   
    0.516
Mmc1_0733
PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: xoo:XOO0166 ATP-dependent RNA helicase.
       0.498
pstB
Phosphate ABC transporter ATP-binding protein, PhoT family; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
   
  
 0.492
Mmc1_3404
TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: ppr:PBPRB1010 hypothetical protein.
 
  
 
0.483
Mmc1_3535
TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: rpa:RPA1385 putative phosphonate transport system substrate-binding protein.
  
  
 
0.419
Your Current Organism:
Magnetococcus marinus
NCBI taxonomy Id: 156889
Other names: M. marinus MC-1, Magnetococcus marinus MC-1, Magnetococcus marinus str. MC-1, Magnetococcus marinus strain MC-1, Magnetococcus sp. MC-1
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.