STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mmc1_1000Hypothetical protein. (84 aa)    
Predicted Functional Partners:
Mmc1_1001
KEGG: noc:Noc_1326 sterol desaturase-related protein.
       0.486
Mmc1_1002
PFAM: heat shock protein DnaJ domain protein; KEGG: mhu:Mhun_0257 heat shock protein DnaJ-like.
       0.486
Mmc1_0997
KEGG: pfl:PFL_5943 hypothetical protein.
       0.401
Mmc1_0998
Putative signal transduction protein; PFAM: HDOD; KEGG: mag:amb2955 response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
       0.401
Mmc1_0999
PFAM: OmpA/MotB domain protein; KEGG: pcr:Pcryo_0954 hypothetical protein.
       0.401
Your Current Organism:
Magnetococcus marinus
NCBI taxonomy Id: 156889
Other names: M. marinus MC-1, Magnetococcus marinus MC-1, Magnetococcus marinus str. MC-1, Magnetococcus marinus strain MC-1, Magnetococcus sp. MC-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.