STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mmc1_1192PFAM: protein of unknown function DUF269; KEGG: dar:Daro_1508 protein of unknown function DUF269. (149 aa)    
Predicted Functional Partners:
Mmc1_1195
KEGG: dar:Daro_1501 nitrogenase MoFe cofactor biosynthesis protein NifE; TIGRFAM: nitrogenase MoFe cofactor biosynthesis protein NifE; PFAM: oxidoreductase/nitrogenase, component 1; Belongs to the NifD/NifK/NifE/NifN family.
 
    0.938
Mmc1_1194
KEGG: dar:Daro_1505 nitrogenase molybdenum-iron cofactor biosynthesis protein; TIGRFAM: nitrogenase molybdenum-iron cofactor biosynthesis protein NifN; PFAM: oxidoreductase/nitrogenase, component 1; Belongs to the NifD/NifK/NifE/NifN family.
 
    0.930
Mmc1_1193
PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis; KEGG: dar:Daro_1506 dinitrogenase iron-molybdenum cofactor biosynthesis.
 
  
 0.929
Mmc1_1191
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: dar:Daro_1510 4Fe-4S ferredoxin, iron-sulfur binding.
 
    0.924
Mmc1_1189
PFAM: NifZ family protein; KEGG: eca:ECA2942 nitrogen fixation protein.
 
    0.920
Mmc1_1188
PFAM: ferredoxin; KEGG: rpc:RPC_1840 ferredoxin.
 
    0.887
Mmc1_1201
Mo-nitrogenase MoFe protein subunit NifD precursor; KEGG: dar:Daro_1414 nitrogenase molybdenum-iron protein alpha chain:nitrogenase component I, alpha chain; TIGRFAM: nitrogenase molybdenum-iron protein alpha chain; nitrogenase component I, alpha chain; PFAM: oxidoreductase/nitrogenase, component 1.
 
    0.836
Mmc1_1200
Mo-nitrogenase MoFe protein subunit NifK; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family.
 
    0.826
Mmc1_1209
PFAM: NifQ family protein; KEGG: bxe:Bxe_B1476 putative nitrogen fixation-related protein(NifQ).
 
    0.818
Mmc1_1198
PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis; KEGG: dar:Daro_1410 dinitrogenase iron-molybdenum cofactor biosynthesis.
 
  
 0.813
Your Current Organism:
Magnetococcus marinus
NCBI taxonomy Id: 156889
Other names: M. marinus MC-1, Magnetococcus marinus MC-1, Magnetococcus marinus str. MC-1, Magnetococcus marinus strain MC-1, Magnetococcus sp. MC-1
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.