STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mmc1_1223Transporter, CPA2 family; PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: pha:PSHAa0856 glutathione-regulated potassium-efflux system protein (K(+)/H(+) antiporter); TC 2.A.37; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. (531 aa)    
Predicted Functional Partners:
Mmc1_1569
Kef-type potassium/proton antiporter, CPA2 family; PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: cjr:CJE1366 sodium/hydrogen exchanger family protein; TC 2.A.37.1; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
 
   
0.695
Mmc1_3436
Cation transporter; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA; Belongs to the TrkH potassium transport family.
  
 
 0.572
Mmc1_3602
PFAM: cation transporter; KEGG: sat:SYN_01091 potassium uptake protein.
  
 
 0.572
Mmc1_0736
uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.
  
    0.538
Mmc1_1495
Molybdopterin synthase subunit MoaE; TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; molybdopterin biosynthesis MoaE; KEGG: reu:Reut_A1989 molybdopterin biosynthesis MoaE.
  
    0.531
Mmc1_1222
PFAM: beta-lactamase domain protein; KEGG: eba:ebA2905 hypothetical protein.
       0.519
Mmc1_3434
Kef-type potassium/proton antiporter, CPA2 family; PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: gme:Gmet_1105 sodium/hydrogen exchanger; TC 2.A.37.1; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
 
   
0.504
Mmc1_1224
PFAM: transposase IS66; KEGG: hal:VNG0056H hypothetical protein encoded by ISH10.
       0.477
Mmc1_1698
PFAM: UspA domain protein; KEGG: afu:AF1612 cationic amino acid transporter (cat-1).
  
  
 0.426
Your Current Organism:
Magnetococcus marinus
NCBI taxonomy Id: 156889
Other names: M. marinus MC-1, Magnetococcus marinus MC-1, Magnetococcus marinus str. MC-1, Magnetococcus marinus strain MC-1, Magnetococcus sp. MC-1
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