STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mmc1_1318PFAM: DNA methylase N-4/N-6 domain protein; ParB domain protein nuclease; KEGG: mag:amb0363 modification methylase DpnIIB. (452 aa)    
Predicted Functional Partners:
Mmc1_1317
KEGG: mag:amb1168 hypothetical protein.
       0.775
rsmG
16S rRNA m(7)G-527 methyltransferase; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.
  
  
 0.605
Mmc1_2100
PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: csa:Csal_1494 cobyrinic acid a,c-diamide synthase.
  
 
 0.595
Mmc1_2122
ATPases involved in chromosome partitioning-like protein; KEGG: mca:MCA2341 ParA family protein.
  
 
 0.595
Mmc1_3256
Plasmid segregation oscillating ATPase ParF; PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: aae:aq_aa35 hypothetical protein.
  
 
 0.595
Mmc1_3303
Tetratricopeptide domain protein; SMART: RNA-processing protein, HAT helix repeating-containing protein; Tetratricopeptide domain protein; KEGG: pgi:PG1014 TPR domain protein.
  
 
 0.595
Mmc1_3751
Chromosome segregation ATPase; PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: mag:amb0004 ATPase involved in chromosome partitioning.
  
 
 0.595
Mmc1_1316
SMART: HNH nuclease; KEGG: pca:Pcar_2805 hypothetical protein.
  
  
 0.579
Mmc1_2389
KEGG: dsy:DSY0035 hypothetical protein.
 
    0.578
Mmc1_1320
KEGG: mca:MCA2656 hypothetical protein.
  
   
 0.531
Your Current Organism:
Magnetococcus marinus
NCBI taxonomy Id: 156889
Other names: M. marinus MC-1, Magnetococcus marinus MC-1, Magnetococcus marinus str. MC-1, Magnetococcus marinus strain MC-1, Magnetococcus sp. MC-1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.