STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mmc1_1790PFAM: transposase IS66; KEGG: ppu:PP3985 ISPpu13, transposase Orf2. (526 aa)    
Predicted Functional Partners:
Mmc1_1791
PFAM: IS66 Orf2 family protein; KEGG: rme:Rmet_1275 IS66 Orf2 like.
       0.661
Mmc1_1792
Hypothetical protein.
       0.661
Mmc1_1789
PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: dps:DP1898 similar to methyl-accepting chemotaxis protein (TlpB).
       0.556
Mmc1_1224
PFAM: transposase IS66; KEGG: hal:VNG0056H hypothetical protein encoded by ISH10.
  
     0.538
Mmc1_2795
PFAM: transposase IS66; KEGG: mxa:MXAN_4128 transposase, unclassified family.
  
     0.525
Mmc1_1376
PFAM: transposase IS66; KEGG: mxa:MXAN_4128 transposase, unclassified family.
  
     0.512
Mmc1_0442
PFAM: transposase IS66; KEGG: hal:VNG0056H hypothetical protein encoded by ISH10.
  
     0.443
Mmc1_0875
PFAM: transposase IS66; KEGG: hal:VNG0056H hypothetical protein encoded by ISH10.
  
     0.443
Mmc1_1134
PFAM: transposase IS66; KEGG: hal:VNG0056H hypothetical protein encoded by ISH10.
  
     0.443
Mmc1_1504
PFAM: transposase IS66; KEGG: hal:VNG0056H hypothetical protein encoded by ISH10.
  
     0.443
Your Current Organism:
Magnetococcus marinus
NCBI taxonomy Id: 156889
Other names: M. marinus MC-1, Magnetococcus marinus MC-1, Magnetococcus marinus str. MC-1, Magnetococcus marinus strain MC-1, Magnetococcus sp. MC-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.