STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mmc1_1817PFAM: acriflavin resistance protein; KEGG: tbd:Tbd_2397 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1084 aa)    
Predicted Functional Partners:
Mmc1_1818
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: son:SO3102 AcrA/AcrE family protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.968
Mmc1_0980
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: vch:VCA0639 AcrA/AcrE family protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.864
Mmc1_1736
KEGG: sil:SPO0443 hypothetical protein.
 
     0.775
Mmc1_3248
TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: eba:ebA3872 AcrA/AcrE family putative membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.761
Mmc1_0309
TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: noc:Noc_1992 secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.643
Mmc1_2174
KEGG: nmu:Nmul_A0923 secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.631
Mmc1_2524
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: eba:ebA7103 putative HlyD-like secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.604
Mmc1_1151
KEGG: cvi:CV0466 hypothetical protein.
 
 
 0.567
Mmc1_0419
KEGG: mag:amb3274 membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.530
Mmc1_3162
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: dps:DP1698 related to acriflavine resistance protein E [precursor] septum formation and cell membrane permeability; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.529
Your Current Organism:
Magnetococcus marinus
NCBI taxonomy Id: 156889
Other names: M. marinus MC-1, Magnetococcus marinus MC-1, Magnetococcus marinus str. MC-1, Magnetococcus marinus strain MC-1, Magnetococcus sp. MC-1
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