STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mmc1_1906Diheme cytochrome SoxA (sulfur oxidation); KEGG: bja:blr3514 probable diheme cytochrome c. (294 aa)    
Predicted Functional Partners:
Mmc1_1907
Sulfur compound chelating protein SoxZ; KEGG: aae:aq_1809 hypothetical protein.
 
  
 0.994
Mmc1_1909
Monoheme cytochrome SoxX (sulfur oxidation); KEGG: bja:blr3511 probable cytochrome c.
 
 
 0.994
Mmc1_3717
Monoheme cytochrome SoxX (sulfur oxidation); KEGG: bja:blr3511 probable cytochrome c.
 
 
 0.991
Mmc1_1908
Thiosulfate-binding protein SoxY; KEGG: rpb:RPB_4371 twin-arginine translocation pathway signal.
 
  
 0.990
Mmc1_1905
Sulfate thiol esterase SoxB; PFAM: 5'-Nucleotidase domain protein; KEGG: bja:blr3515 probable Mn-dependent hydrolase; Belongs to the 5'-nucleotidase family.
 
  
 0.988
Mmc1_2997
KEGG: rpa:RPA4467 sulfur oxidation protein SoxY.
 
  
 0.979
Mmc1_2998
Sulfur compound chelating protein SoxZ; KEGG: aae:aq_1809 hypothetical protein.
 
  
 0.979
Mmc1_3716
Thiosulfate-binding protein SoxY; KEGG: rpd:RPD_4255 twin-arginine translocation pathway signal.
 
  
 0.979
Mmc1_0501
PFAM: Rhodanese domain protein; KEGG: noc:Noc_0191 thiosulfate sulfurtransferase.
  
 
 0.912
Mmc1_1708
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: mag:amb3377 Fe-S-cluster-containing hydrogenase components 1.
    
  0.904
Your Current Organism:
Magnetococcus marinus
NCBI taxonomy Id: 156889
Other names: M. marinus MC-1, Magnetococcus marinus MC-1, Magnetococcus marinus str. MC-1, Magnetococcus marinus strain MC-1, Magnetococcus sp. MC-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.