STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mmc1_1921PFAM: protein kinase; protein of unknown function DUF323; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: bte:BTH_II0256 serine/threonine protein kinase. (715 aa)    
Predicted Functional Partners:
Mmc1_3143
SMART: protein phosphatase 2C domain protein; KEGG: ade:Adeh_3691 serine/threonine phosphatase.
 
 
 0.923
Mmc1_3142
PFAM: Forkhead-associated protein; adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: reu:Reut_B4853 adenylyl cyclase class-3/4/guanylyl cyclase.
 
 
 
 0.708
Mmc1_0288
PFAM: WD-40 repeat protein; protein of unknown function DUF323; KEGG: dps:DP2422 hypothetical protein.
 
  
0.552
Mmc1_1922
Hypothetical protein.
       0.550
Mmc1_2112
Cache sensor hybrid histidine kinase; PFAM: response regulator receiver; GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: cvi:CV1579 probable two-component hybrid sensor and regulator.
   
 
 0.542
Mmc1_1033
TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: gsu:GSU2270 ABC transporter, permease protein.
  
    0.520
Mmc1_3359
PFAM: protein kinase; Sel1 domain protein repeat-containing protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: tbd:Tbd_0475 serine/threonine protein kinase.
 
  
0.501
Mmc1_3360
PFAM: protein kinase; Sel1 domain protein repeat-containing protein; SMART: serine/threonine protein kinase; KEGG: bte:BTH_II0256 serine/threonine protein kinase.
 
  
0.499
Mmc1_3477
PFAM: WD-40 repeat protein; peptidase C14, caspase catalytic subunit p20; KEGG: bbr:BB4985 hypothetical protein.
 
  
 0.465
Mmc1_1951
PFAM: protein kinase; Sel1 domain protein repeat-containing protein; SMART: serine/threonine protein kinase; KEGG: nmu:Nmul_A0104 Sel1-like repeat.
 
  
0.445
Your Current Organism:
Magnetococcus marinus
NCBI taxonomy Id: 156889
Other names: M. marinus MC-1, Magnetococcus marinus MC-1, Magnetococcus marinus str. MC-1, Magnetococcus marinus strain MC-1, Magnetococcus sp. MC-1
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