STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mmc1_1957PFAM: glycosyl transferase, family 2; KEGG: rru:Rru_A2124 glycosyl transferase, family 2. (327 aa)    
Predicted Functional Partners:
Mmc1_1959
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mma:MM2219 hypothetical protein.
 
     0.729
Mmc1_1143
PFAM: glycosyl transferase, family 2; KEGG: hch:HCH_06165 glycosyltransferase, probably involved in cell wall biogenesis.
  
     0.720
Mmc1_1958
Hypothetical protein.
  
  
 0.556
Mmc1_0583
PFAM: sugar transferase; KEGG: tbd:Tbd_0199 putative glycosyltransferase.
  
  
 0.554
Mmc1_1960
KEGG: mlo:mlr7557 hypothetical protein.
 
  
 0.554
Mmc1_0613
PFAM: glycosyl transferase, family 2; KEGG: bsu:BG13230 similar to dolichol phosphate mannose synthase.
 
     0.427
Mmc1_2869
PFAM: glycosyl transferase, family 2; KEGG: ava:Ava_3351 glycosyl transferase, family 2.
 
     0.415
Your Current Organism:
Magnetococcus marinus
NCBI taxonomy Id: 156889
Other names: M. marinus MC-1, Magnetococcus marinus MC-1, Magnetococcus marinus str. MC-1, Magnetococcus marinus strain MC-1, Magnetococcus sp. MC-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.