STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mmc1_1958Hypothetical protein. (468 aa)    
Predicted Functional Partners:
Mmc1_1960
KEGG: mlo:mlr7557 hypothetical protein.
  
  
 0.690
Mmc1_1959
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mma:MM2219 hypothetical protein.
  
    0.676
Mmc1_1957
PFAM: glycosyl transferase, family 2; KEGG: rru:Rru_A2124 glycosyl transferase, family 2.
  
  
 0.556
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
  
 0.538
Mmc1_2590
KEGG: cte:CT0220 hypothetical protein.
  
  
 0.538
Mmc1_0148
PFAM: polysaccharide deacetylase; KEGG: dde:Dde_3250 polysaccharide deacetylase family protein.
  
  
 0.458
Mmc1_0389
KEGG: bca:BCE0977 hypothetical protein.
  
  
 0.458
Mmc1_0588
PFAM: polysaccharide deacetylase; KEGG: tbd:Tbd_0287 polysaccharide deacetylase.
  
  
 0.458
Mmc1_1175
PFAM: polysaccharide deacetylase; KEGG: noc:Noc_2914 hypothetical protein.
  
  
 0.458
Mmc1_1155
KEGG: pgi:PG0114 hypothetical protein.
  
  
 0.451
Your Current Organism:
Magnetococcus marinus
NCBI taxonomy Id: 156889
Other names: M. marinus MC-1, Magnetococcus marinus MC-1, Magnetococcus marinus str. MC-1, Magnetococcus marinus strain MC-1, Magnetococcus sp. MC-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.