STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mmc1_2157KEGG: cch:Cag_1955 sulfite reductase, dissimilatory-type beta subunit; TIGRFAM: sulfite reductase, dissimilatory-type beta subunit; PFAM: nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region. (357 aa)    
Predicted Functional Partners:
Mmc1_2156
KEGG: cte:CT2249 sulfite reductase, dissimilatory-type, alpha subunit; TIGRFAM: sulfite reductase, dissimilatory-type alpha subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region.
 
0.999
Mmc1_0048
PFAM: DsrC family protein; KEGG: tbd:Tbd_2480 putative sulfite reductase.
 
 
 
 0.988
Mmc1_1742
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; thiamine pyrophosphate enzyme domain protein TPP-binding; KEGG: rpb:RPB_0851 pyruvate flavodoxin/ferredoxin oxidoreductase.
  
 
 0.932
Mmc1_0297
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: tcx:Tcr_1381 sulfide-quinone reductase.
  
 
  0.915
Mmc1_1799
KEGG: mag:amb3543 DMSO reductase anchor subunit.
 
  
  0.915
Mmc1_1800
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: mag:amb3542 Fe-S-cluster-containing hydrogenase components 1.
  
 
 0.914
Mmc1_2497
KEGG: mag:amb1644 Ni,Fe-hydrogenase I large subunit.
  
  
 0.914
Mmc1_0881
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: pho:PH1290 cytochrome-c3 hydrogenase alpha chain.
  
 
 0.912
Mmc1_1801
PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: mag:amb3541 anaerobic dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
    
 0.909
Mmc1_0883
PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; KEGG: tko:TK2070 cytosolic NiFe-hydrogenase, delta subunit.
     
 0.908
Your Current Organism:
Magnetococcus marinus
NCBI taxonomy Id: 156889
Other names: M. marinus MC-1, Magnetococcus marinus MC-1, Magnetococcus marinus str. MC-1, Magnetococcus marinus strain MC-1, Magnetococcus sp. MC-1
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