STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mmc1_2359TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; PFAM: cytochrome oxidase maturation protein cbb3-type; KEGG: hch:HCH_02268 cytochrome oxidase maturation protein, cbb3-type. (65 aa)    
Predicted Functional Partners:
Mmc1_2360
KEGG: tcx:Tcr_1960 heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; SMART: TRASH domain protein.
  
  
 0.664
Mmc1_2352
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: mlo:mll6626 nitrogen fixation protein FixG.
 
  
 0.606
Mmc1_2355
Cytochrome c oxidase, cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
  
 0.587
Mmc1_2354
TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; PFAM: cytochrome C oxidase, mono-heme subunit/FixO; KEGG: sil:SPO3525 cytochrome c oxidase, cbb3-type, subunit II.
 
  
 0.575
Mmc1_2353
TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; PFAM: cytochrome c oxidase, subunit I; KEGG: mfa:Mfla_0629 cytochrome c oxidase, cbb3-type, subunit I; Belongs to the heme-copper respiratory oxidase family.
 
   
 0.572
Mmc1_0727
KEGG: tcx:Tcr_0203 hypothetical protein.
 
     0.521
Mmc1_0553
KEGG: tbd:Tbd_1840 hypothetical protein.
 
  
 0.505
Mmc1_1003
Heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: sat:SYN_01290 copper-exporting ATPase.
  
  
 0.482
Mmc1_2351
Hypothetical protein; KEGG: mag:amb4367 predicted integral membrane protein linked to a cation pump.
 
  
 0.466
Mmc1_2361
KEGG: tbd:Tbd_2115 RND multidrug efflux membrane fusion protein MexE precursor.
       0.440
Your Current Organism:
Magnetococcus marinus
NCBI taxonomy Id: 156889
Other names: M. marinus MC-1, Magnetococcus marinus MC-1, Magnetococcus marinus str. MC-1, Magnetococcus marinus strain MC-1, Magnetococcus sp. MC-1
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