Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Mmc1_2466 | Mmc1_2467 | KEGG: tbd:Tbd_1716 hypothetical protein. | TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: bte:BTH_I1847 exodeoxyribonuclease III. | 0.773 |
Mmc1_2466 | Mmc1_2468 | KEGG: tbd:Tbd_1716 hypothetical protein. | Guanosine-3',5'-bis(diphosphate) 3'-diphosphatase; PFAM: TGS domain protein; KEGG: lil:LA3085 GTP pyrophosphokinase. | 0.565 |
Mmc1_2466 | Mmc1_2469 | KEGG: tbd:Tbd_1716 hypothetical protein. | KEGG: ade:Adeh_1134 hypothetical protein. | 0.487 |
Mmc1_2467 | Mmc1_2466 | TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: bte:BTH_I1847 exodeoxyribonuclease III. | KEGG: tbd:Tbd_1716 hypothetical protein. | 0.773 |
Mmc1_2467 | Mmc1_2468 | TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: bte:BTH_I1847 exodeoxyribonuclease III. | Guanosine-3',5'-bis(diphosphate) 3'-diphosphatase; PFAM: TGS domain protein; KEGG: lil:LA3085 GTP pyrophosphokinase. | 0.575 |
Mmc1_2467 | Mmc1_2469 | TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: bte:BTH_I1847 exodeoxyribonuclease III. | KEGG: ade:Adeh_1134 hypothetical protein. | 0.487 |
Mmc1_2468 | Mmc1_2466 | Guanosine-3',5'-bis(diphosphate) 3'-diphosphatase; PFAM: TGS domain protein; KEGG: lil:LA3085 GTP pyrophosphokinase. | KEGG: tbd:Tbd_1716 hypothetical protein. | 0.565 |
Mmc1_2468 | Mmc1_2467 | Guanosine-3',5'-bis(diphosphate) 3'-diphosphatase; PFAM: TGS domain protein; KEGG: lil:LA3085 GTP pyrophosphokinase. | TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: bte:BTH_I1847 exodeoxyribonuclease III. | 0.575 |
Mmc1_2468 | Mmc1_2469 | Guanosine-3',5'-bis(diphosphate) 3'-diphosphatase; PFAM: TGS domain protein; KEGG: lil:LA3085 GTP pyrophosphokinase. | KEGG: ade:Adeh_1134 hypothetical protein. | 0.658 |
Mmc1_2469 | Mmc1_2466 | KEGG: ade:Adeh_1134 hypothetical protein. | KEGG: tbd:Tbd_1716 hypothetical protein. | 0.487 |
Mmc1_2469 | Mmc1_2467 | KEGG: ade:Adeh_1134 hypothetical protein. | TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: bte:BTH_I1847 exodeoxyribonuclease III. | 0.487 |
Mmc1_2469 | Mmc1_2468 | KEGG: ade:Adeh_1134 hypothetical protein. | Guanosine-3',5'-bis(diphosphate) 3'-diphosphatase; PFAM: TGS domain protein; KEGG: lil:LA3085 GTP pyrophosphokinase. | 0.658 |