STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mmc1_2476PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: btk:BT9727_1112 possible O-antigen biosynthesis protein; possible glycosyltransferase; possible methyltransferase. (229 aa)    
Predicted Functional Partners:
Mmc1_2475
PFAM: CreA family protein; KEGG: creA; creA protein.
       0.737
Mmc1_2473
KEGG: atc:AGR_C_3474 hypothetical 25.1 kDa protein in CobV 5'region (orf1).
  
    0.671
Mmc1_2474
PFAM: protein of unknown function DUF540; KEGG: ypk:y1490 cysZ protein.
       0.661
Mmc1_0627
KEGG: dvu:DVU1410 hypothetical protein.
     0.587
Mmc1_3277
PFAM: glycosyl transferase, family 2; KEGG: chy:CHY_0980 glycosyl transferase, group 2 family.
  
 0.584
Mmc1_1143
PFAM: glycosyl transferase, family 2; KEGG: hch:HCH_06165 glycosyltransferase, probably involved in cell wall biogenesis.
 
     0.444
Mmc1_3033
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: tel:tlr1953 hypothetical protein.
  
     0.434
Your Current Organism:
Magnetococcus marinus
NCBI taxonomy Id: 156889
Other names: M. marinus MC-1, Magnetococcus marinus MC-1, Magnetococcus marinus str. MC-1, Magnetococcus marinus strain MC-1, Magnetococcus sp. MC-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.