STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mmc1_2575TIGRFAM: addiction module antitoxin, RelB/DinJ family; PFAM: RelB antitoxin; KEGG: sat:SYN_02228 DNA -damage-inducible protein J. (95 aa)    
Predicted Functional Partners:
Mmc1_1352
PFAM: UvrD/REP helicase; KEGG: ecs:ECs5264 putative DNA helicase.
 
 
 0.911
Mmc1_2574
Protein C, Serine peptidase, MEROPS family S49; PFAM: peptidase S49; KEGG: rso:RSc0858 probable bacteriophage-related protein.
       0.544
Mmc1_2570
Hypothetical protein.
       0.527
Mmc1_2571
Hypothetical protein.
       0.527
Mmc1_2572
KEGG: wol:WD0274 hypothetical protein.
       0.527
Mmc1_2573
KEGG: bxe:Bxe_A3061 putative phage protein GP19.
       0.527
Mmc1_2565
Hypothetical protein.
       0.520
Mmc1_2566
KEGG: hch:HCH_02903 hypothetical protein.
       0.520
Mmc1_2567
Hypothetical protein.
       0.520
Mmc1_2568
Hypothetical protein.
       0.520
Your Current Organism:
Magnetococcus marinus
NCBI taxonomy Id: 156889
Other names: M. marinus MC-1, Magnetococcus marinus MC-1, Magnetococcus marinus str. MC-1, Magnetococcus marinus strain MC-1, Magnetococcus sp. MC-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.