STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mmc1_2647Amino acid/amide ABC transporter substrate-binding protein, HAAT family; PFAM: Extracellular ligand-binding receptor; KEGG: rpb:RPB_2081 twin-arginine translocation pathway signal; TC 3.A.1.4.-. (397 aa)    
Predicted Functional Partners:
Mmc1_0487
Amino acid/amide ABC transporter membrane protein 1, HAAT family; PFAM: inner-membrane translocator; KEGG: pfo:Pfl_0553 inner-membrane translocator; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.984
Mmc1_0489
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pae:PA4910 putative branched-chain amino acid transport system ATP-binding protein; TC 3.A.1.4.-.
 
 
 0.984
Mmc1_0488
Amino acid/amide ABC transporter membrane protein 2, HAAT family; PFAM: inner-membrane translocator; KEGG: psb:Psyr_0599 inner-membrane translocator; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.983
Mmc1_0490
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pfo:Pfl_0556 ABC transporter-like; TC 3.A.1.4.-.
 
 
 0.980
Mmc1_0486
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; PFAM: Extracellular ligand-binding receptor; KEGG: pae:PA4913 putative branched-chain amino acid transport system substrate-binding protein; TC 3.A.1.4.-.
  
 
0.928
Mmc1_0192
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; KEGG: cps:CPS_3260 hypothetical protein; TC 3.A.1.4.-.
  
  
 
0.924
Mmc1_2139
TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: wsu:WS1863 C4-dicarboxylate-binding periplasmic protein precursor.
 
    
 0.894
Mmc1_2648
PAS/PAC sensor hybrid histidine kinase; KEGG: sat:SYN_00226 signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
   
 
 0.788
Mmc1_1020
Amino acid/amide ABC transporter membrane protein 1, HAAT family; PFAM: inner-membrane translocator; PBS lyase HEAT domain protein repeat-containing protein; KEGG: sme:SMb20604 putative ureashort-chain amide or branched-chain amino acid uptake ABC transporter permease protein, possibly fusion protein; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.630
Mmc1_1023
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: hch:HCH_04514 ABC-type branched-chain amino acid transport system, ATPase component; TC 3.A.1.4.-.
 
  
 0.613
Your Current Organism:
Magnetococcus marinus
NCBI taxonomy Id: 156889
Other names: M. marinus MC-1, Magnetococcus marinus MC-1, Magnetococcus marinus str. MC-1, Magnetococcus marinus strain MC-1, Magnetococcus sp. MC-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.