STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mmc1_2794PFAM: Sporulation domain protein; KEGG: plt:Plut_0082 hypothetical protein. (671 aa)    
Predicted Functional Partners:
Mmc1_2792
KEGG: plt:Plut_0084 hypothetical protein.
 
  
 0.956
Mmc1_2793
KEGG: mma:MM2238 hypothetical protein.
       0.773
Mmc1_2791
KEGG: dps:DP0589 hypothetical protein.
  
    0.748
Mmc1_2790
KEGG: dps:DP0590 periplasmic protein.
  
  
 0.737
ftsA
Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.
   
 
 0.492
Mmc1_2789
PFAM: transposase, IS4 family protein; KEGG: bte:BTH_II0087 transposase.
       0.480
Mmc1_0264
PFAM: Colicin V production protein; KEGG: son:SO3065 colicin V production protein.
  
    0.469
Mmc1_3336
PFAM: OstA family protein; KEGG: sat:SYN_00947 organic solvent tolerance protein.
  
    0.446
Mmc1_0749
Polypeptide-transport-associated domain protein, FtsQ-type; Essential cell division protein.
   
 
 0.415
Mmc1_2795
PFAM: transposase IS66; KEGG: mxa:MXAN_4128 transposase, unclassified family.
       0.412
Your Current Organism:
Magnetococcus marinus
NCBI taxonomy Id: 156889
Other names: M. marinus MC-1, Magnetococcus marinus MC-1, Magnetococcus marinus str. MC-1, Magnetococcus marinus strain MC-1, Magnetococcus sp. MC-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.