STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mmc1_2888Hypothetical protein. (123 aa)    
Predicted Functional Partners:
Mmc1_2885
Hypothetical protein.
       0.773
Mmc1_2886
KEGG: hch:HCH_02903 hypothetical protein.
       0.773
Mmc1_2887
Hypothetical protein.
       0.773
Mmc1_2889
Hypothetical protein.
       0.773
Mmc1_2890
Hypothetical protein.
       0.762
Mmc1_2891
Hypothetical protein.
       0.762
Mmc1_2892
KEGG: wol:WD0274 hypothetical protein.
       0.762
Mmc1_2893
KEGG: bxe:Bxe_A3061 putative phage protein GP19.
       0.762
Mmc1_2894
Protein C, Serine peptidase, MEROPS family S49; PFAM: peptidase S49; KEGG: rso:RSc0858 probable bacteriophage-related protein.
       0.736
Mmc1_2895
PFAM: plasmid maintenance system killer; KEGG: dvu:DVU1729 killer protein, putative.
       0.522
Your Current Organism:
Magnetococcus marinus
NCBI taxonomy Id: 156889
Other names: M. marinus MC-1, Magnetococcus marinus MC-1, Magnetococcus marinus str. MC-1, Magnetococcus marinus strain MC-1, Magnetococcus sp. MC-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.