STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mmc1_2979KEGG: nar:Saro_1624 hypothetical protein. (508 aa)    
Predicted Functional Partners:
Mmc1_2980
Hypothetical protein.
       0.793
Mmc1_2982
KEGG: nmu:Nmul_A2433 hypothetical protein.
       0.793
Mmc1_2981
PFAM: glycosyl transferase, group 1; KEGG: nar:Saro_1626 glycosyl transferase, group 1.
       0.773
Mmc1_2978
KEGG: pfl:PFL_2974 lipoprotein, putative.
       0.729
Mmc1_2977
Hypothetical protein; KEGG: rpd:RPD_0476 OmpA/MotB.
       0.553
Mmc1_2974
PFAM: TM1410 hypothetical-related protein; KEGG: nar:Saro_1621 putative signal peptide protein.
       0.470
Mmc1_2975
KEGG: rso:RSc3137 hypothetical protein.
       0.470
Mmc1_2976
Hypothetical protein; KEGG: eba:ebA900 predicted N-acetylglucosaminyl transferase.
       0.469
Your Current Organism:
Magnetococcus marinus
NCBI taxonomy Id: 156889
Other names: M. marinus MC-1, Magnetococcus marinus MC-1, Magnetococcus marinus str. MC-1, Magnetococcus marinus strain MC-1, Magnetococcus sp. MC-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.