STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mmc1_2995Sulfide dehydrogenase (flavocytochrome), cytochrome c subunit; PFAM: cytochrome c, class I; KEGG: pfo:Pfl_2741 cytochrome c, class I. (213 aa)    
Predicted Functional Partners:
Mmc1_2996
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cch:Cag_2004 sulfide dehydrogenase, flavoprotein subunit.
 
 
 0.999
Mmc1_0883
PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; KEGG: tko:TK2070 cytosolic NiFe-hydrogenase, delta subunit.
  
  
  0.911
Mmc1_0297
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: tcx:Tcr_1381 sulfide-quinone reductase.
  
 
 0.910
Mmc1_2448
Sulfide-quinone oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: tbd:Tbd_2225 sulfide-quinone reductase.
  
 
 0.910
Mmc1_3416
TIGRFAM: cysteine synthases; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; KEGG: gme:Gmet_1558 cysteine synthase A.
     
 0.909
Mmc1_0881
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: pho:PH1290 cytochrome-c3 hydrogenase alpha chain.
    
 0.904
metZ
Cystathionine gamma-synthase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.
     
  0.900
Mmc1_2156
KEGG: cte:CT2249 sulfite reductase, dissimilatory-type, alpha subunit; TIGRFAM: sulfite reductase, dissimilatory-type alpha subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region.
     
  0.900
Mmc1_2157
KEGG: cch:Cag_1955 sulfite reductase, dissimilatory-type beta subunit; TIGRFAM: sulfite reductase, dissimilatory-type beta subunit; PFAM: nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region.
     
  0.900
Mmc1_2353
TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; PFAM: cytochrome c oxidase, subunit I; KEGG: mfa:Mfla_0629 cytochrome c oxidase, cbb3-type, subunit I; Belongs to the heme-copper respiratory oxidase family.
 
 
 0.654
Your Current Organism:
Magnetococcus marinus
NCBI taxonomy Id: 156889
Other names: M. marinus MC-1, Magnetococcus marinus MC-1, Magnetococcus marinus str. MC-1, Magnetococcus marinus strain MC-1, Magnetococcus sp. MC-1
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