STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mmc1_3215PFAM: beta-lactamase domain protein; KEGG: rfr:Rfer_1985 beta-lactamase-like. (295 aa)    
Predicted Functional Partners:
Mmc1_1112
PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; CHASE2 domain protein; KEGG: pol:Bpro_0721 adenylate/guanylate cyclase.
 
     0.789
Mmc1_3697
PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; CHASE2 domain protein; KEGG: mag:amb2235 adenylate cyclase.
 
     0.781
Mmc1_1858
PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; CHASE2 domain protein; KEGG: mfa:Mfla_2129 adenylate/guanylate cyclase.
 
     0.773
Mmc1_1205
PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; histidine kinase, HAMP region domain protein; KEGG: mag:amb3618 adenylate cyclase 1.
 
     0.758
Mmc1_1046
PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; histidine kinase, HAMP region domain protein; KEGG: mag:amb3618 adenylate cyclase 1.
 
     0.757
Mmc1_2543
PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; histidine kinase, HAMP region domain protein; KEGG: mag:amb1226 adenylate cyclase 1.
 
     0.757
Mmc1_3029
PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; response regulator receiver; KEGG: lic:LIC20094 adenylate/guanylate cyclase.
 
     0.757
Mmc1_3214
Putative signal transduction protein; PFAM: HDOD; KEGG: rfr:Rfer_1986 metal dependent phosphohydrolase.
 
     0.753
Mmc1_1583
PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; histidine kinase, HAMP region domain protein; KEGG: lil:LA3234 adenylate cyclase.
 
     0.717
Mmc1_3142
PFAM: Forkhead-associated protein; adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: reu:Reut_B4853 adenylyl cyclase class-3/4/guanylyl cyclase.
 
     0.713
Your Current Organism:
Magnetococcus marinus
NCBI taxonomy Id: 156889
Other names: M. marinus MC-1, Magnetococcus marinus MC-1, Magnetococcus marinus str. MC-1, Magnetococcus marinus strain MC-1, Magnetococcus sp. MC-1
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