STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mmc1_3227PFAM: response regulator receiver; KEGG: pmi:PMT9312_0130 two component transcriptional regulator, winged helix family. (134 aa)    
Predicted Functional Partners:
Mmc1_3226
Amino acid-binding domain sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; SMART: extracellular solute-binding protein, family 3; KEGG: wsu:WS0850 sensory transduction histidine kinase.
 
 
 0.851
Mmc1_3671
Signal transduction histidine kinase, nitrogen specific, NtrB; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: gme:Gmet_2562 signal transduction histidine kinase, nitrogen specific, NtrB.
 
 
 0.843
Mmc1_3394
PAS/PAC sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; SMART: PAS domain containing protein; KEGG: mbu:Mbur_0400 PAS sensor signal transduction histidine kinase.
 
 
 0.801
Mmc1_1899
Periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: mfa:Mfla_2395 periplasmic sensor signal transduction histidine kinase.
 
 
 
 0.788
Mmc1_1536
Histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: cvi:CV0473 probable sensor histidine kinase protein.
 
 
 
 0.785
Mmc1_0401
Response regulator receiver sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: mag:amb3447 signal transduction histidine kinase.
 
 
 
 0.782
Mmc1_1008
Histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: tdn:Tmden_0976 histidine kinase.
  
 
   0.778
Mmc1_1898
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; KEGG: mag:amb3446 response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
  
   0.773
Mmc1_3186
Periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: noc:Noc_0675 signal transduction histidine kinase.
  
 
   0.771
Mmc1_1359
Histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: bca:BCE2662 hypothetical protein.
  
 
   0.762
Your Current Organism:
Magnetococcus marinus
NCBI taxonomy Id: 156889
Other names: M. marinus MC-1, Magnetococcus marinus MC-1, Magnetococcus marinus str. MC-1, Magnetococcus marinus strain MC-1, Magnetococcus sp. MC-1
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