STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mmc1_3251KEGG: eba:ebA2155 hypothetical protein. (249 aa)    
Predicted Functional Partners:
Mmc1_3252
KEGG: aba:Acid345_2010 hypothetical protein.
       0.701
Mmc1_3250
KEGG: mtc:MT0023 hypothetical protein.
       0.481
Mmc1_3249
PFAM: acriflavin resistance protein; KEGG: gme:Gmet_3127 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.464
Mmc1_3253
KEGG: ddi:DDB0188399 hypothetical protein.
       0.418
Your Current Organism:
Magnetococcus marinus
NCBI taxonomy Id: 156889
Other names: M. marinus MC-1, Magnetococcus marinus MC-1, Magnetococcus marinus str. MC-1, Magnetococcus marinus strain MC-1, Magnetococcus sp. MC-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.