STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mmc1_3305TIGRFAM: ABC-2 type transporter, NodJ family; PFAM: ABC-2 type transporter; KEGG: rme:Rmet_2458 ABC-2 type transporter, NodJ family. (258 aa)    
Predicted Functional Partners:
Mmc1_3306
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bbr:BB3278 ABC, transporter, ATP-binding protein.
 
 
 0.990
Mmc1_2288
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ccr:CC0188 ABC transporter, ATP-binding protein.
 
  
 0.806
Mmc1_1006
PFAM: nitroreductase; KEGG: mfa:Mfla_1136 nitroreductase.
  
  
 0.614
Mmc1_1683
KEGG: dar:Daro_0141 nitroreductase; TIGRFAM: cob(II)yrinic acid a,c-diamide reductase; PFAM: nitroreductase.
  
  
 0.614
Mmc1_0376
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: noc:Noc_2142 ABC transporter, ATPase subunit.
  
  
 0.565
Mmc1_0989
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mfa:Mfla_0682 ABC transporter related.
  
  
 0.565
Mmc1_1809
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bbr:BB2382 probable ABC transporter ATP-binding protein.
  
  
 0.565
Mmc1_2287
PFAM: ABC-2 type transporter; KEGG: xom:XOO_0342 permease.
  
  
 
0.541
Mmc1_3304
KEGG: sde:Sde_0641 hypothetical protein.
       0.479
nnrD
Carbohydrate kinase, YjeF related protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow t [...]
       0.433
Your Current Organism:
Magnetococcus marinus
NCBI taxonomy Id: 156889
Other names: M. marinus MC-1, Magnetococcus marinus MC-1, Magnetococcus marinus str. MC-1, Magnetococcus marinus strain MC-1, Magnetococcus sp. MC-1
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