STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mmc1_3306PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bbr:BB3278 ABC, transporter, ATP-binding protein. (302 aa)    
Predicted Functional Partners:
Mmc1_3305
TIGRFAM: ABC-2 type transporter, NodJ family; PFAM: ABC-2 type transporter; KEGG: rme:Rmet_2458 ABC-2 type transporter, NodJ family.
 
 
 0.990
Mmc1_0488
Amino acid/amide ABC transporter membrane protein 2, HAAT family; PFAM: inner-membrane translocator; KEGG: psb:Psyr_0599 inner-membrane translocator; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
      0.882
Mmc1_2287
PFAM: ABC-2 type transporter; KEGG: xom:XOO_0342 permease.
  
 0.830
Mmc1_3138
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mag:amb4338 ABC-type cobalt transport system, ATPase component.
 
   
0.810
Mmc1_0375
KEGG: noc:Noc_2141 ABC transporter, inner membrane protein.
  
 
 0.761
lolD
ABC transporter related protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.
  
0.707
Mmc1_0990
KEGG: noc:Noc_2645 ABC transporter, permease protein, putative.
  
 
 0.598
Mmc1_3114
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: noc:Noc_1273 ABC transporter, ATPase subunit.
 
  
 0.560
nnrD
Carbohydrate kinase, YjeF related protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow t [...]
  
    0.544
atpD
ATP synthase F1 subcomplex beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.
    
 
 0.422
Your Current Organism:
Magnetococcus marinus
NCBI taxonomy Id: 156889
Other names: M. marinus MC-1, Magnetococcus marinus MC-1, Magnetococcus marinus str. MC-1, Magnetococcus marinus strain MC-1, Magnetococcus sp. MC-1
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