STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mmc1_3365Putative phage repressor; PFAM: peptidase S24, S26A and S26B; KEGG: son:SO0641 prophage MuSo1, transcriptional regulator, Cro/CI family. (215 aa)    
Predicted Functional Partners:
Mmc1_1235
PFAM: helicase domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; SMART: AAA ATPase; DEAD-like helicases-like; KEGG: mag:amb0356 DNA or RNA helicase of superfamily II.
  
    0.572
Mmc1_2845
PFAM: helicase domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: DNA/RNA helicase.
  
    0.571
Mmc1_1300
PFAM: helicase domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: DNA/RNA helicase.
  
    0.569
Mmc1_3080
KEGG: dvu:DVU2710 hypothetical protein.
  
   
 0.527
Mmc1_2074
PFAM: helicase domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: DNA/RNA helicase.
   
    0.514
Mmc1_2606
PFAM: helicase domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: ana:alr7157 putative helicase.
   
    0.514
Mmc1_2653
PFAM: helicase domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: DNA/RNA helicase.
   
    0.514
Mmc1_2770
PFAM: helicase domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: DNA/RNA helicase.
   
    0.514
Mmc1_2917
PFAM: helicase domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: mag:amb0356 DNA or RNA helicase of superfamily II.
   
    0.514
Mmc1_1103
PFAM: DsrE family protein; KEGG: sdy:SDY_1271 hypothetical protein.
  
     0.473
Your Current Organism:
Magnetococcus marinus
NCBI taxonomy Id: 156889
Other names: M. marinus MC-1, Magnetococcus marinus MC-1, Magnetococcus marinus str. MC-1, Magnetococcus marinus strain MC-1, Magnetococcus sp. MC-1
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