STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mmc1_3390PFAM: CheB methylesterase; MCP methyltransferase, CheR-type; KEGG: mbu:Mbur_0399 MCP methyltransferase, CheR-type. (617 aa)    
Predicted Functional Partners:
Mmc1_3576
CheA signal transduction histidine kinases; PFAM: response regulator receiver; CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; KEGG: dps:DP2642 related to two-component system sensory/regulatory protein (Che family).
 
 0.997
Mmc1_1482
CheA signal transduction histidine kinases; PFAM: response regulator receiver; CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Hpt domain protein; KEGG: mag:amb3004 Gliding motility regulatory protein.
 
 
 0.992
Mmc1_1834
CheA signal transduction histidine kinases; PFAM: response regulator receiver; CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Hpt domain protein; KEGG: nmu:Nmul_A0333 CheA signal transduction histidine kinase.
 
 
 0.992
Mmc1_3393
Putative PAS/PAC sensor protein; KEGG: mbu:Mbur_0399 MCP methyltransferase, CheR-type; TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
  
 0.989
Mmc1_0629
PFAM: response regulator receiver; CheW domain protein; KEGG: cps:CPS_1474 chemotaxis protein CheV.
  
 
 0.980
Mmc1_1805
PFAM: response regulator receiver; CheW domain protein; KEGG: ilo:IL1149 chemotaxis protein CheV.
  
 
 0.980
flgK
TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; KEGG: lic:LIC13451 flagellar hook-associated protein 1.
  
  
 0.975
Mmc1_2114
KEGG: bba:Bd2849 sensor histidine kinase/response regulator; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
 
 
 0.972
Mmc1_2393
PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: gme:Gmet_1707 multi-sensor hybrid histidine kinase.
 
 
 0.972
Mmc1_2285
CheA signal transduction histidine kinases; PFAM: CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; KEGG: aba:Acid345_1524 CheA signal transduction histidine kinases.
 
 0.971
Your Current Organism:
Magnetococcus marinus
NCBI taxonomy Id: 156889
Other names: M. marinus MC-1, Magnetococcus marinus MC-1, Magnetococcus marinus str. MC-1, Magnetococcus marinus strain MC-1, Magnetococcus sp. MC-1
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