STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mmc1_3554Phosphate uptake regulator, PhoU; Plays a role in the regulation of phosphate uptake. (236 aa)    
Predicted Functional Partners:
pstB
Phosphate ABC transporter ATP-binding protein, PhoT family; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
  
 0.969
Mmc1_1540
TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mca:MCA1073 phosphate ABC transporter, permease protein; TC 3.A.1.7.1.
 
  
 0.937
Mmc1_3266
Phosphate ABC transporter substrate-binding protein, PhoT family; KEGG: mma:MM2005 phosphate-binding protein; TC 3.A.1.7.1.
 
  
 0.863
Mmc1_1584
PFAM: extracellular solute-binding protein, family 1; KEGG: dvu:DVU2477 phosphate ABC transporter, periplasmic phosphate-binding protein PstS; TC 3.A.1.7.1.
 
  
 0.858
Mmc1_1539
Phosphate ABC transporter membrane protein 1, PhoT family; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
  
 0.740
Mmc1_2091
Phosphate ABC transporter substrate-binding protein, PhoT family; KEGG: wsu:WS0762 putative phosphate ABC transporter; TC 3.A.1.7.1.
 
  
 0.662
Mmc1_1544
Phosphate ABC transporter substrate-binding protein, PhoT family; KEGG: mca:MCA0949 phosphate binding protein, putative; TC 3.A.1.7.1.
 
  
 0.635
Mmc1_0906
Signal peptidase I, Serine peptidase, MEROPS family S26A; KEGG: mca:MCA1465 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24, S26A and S26B; Belongs to the peptidase S26 family.
  
    0.530
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
     
 0.485
Mmc1_3334
RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
  
  
 0.475
Your Current Organism:
Magnetococcus marinus
NCBI taxonomy Id: 156889
Other names: M. marinus MC-1, Magnetococcus marinus MC-1, Magnetococcus marinus str. MC-1, Magnetococcus marinus strain MC-1, Magnetococcus sp. MC-1
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