STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mmc1_3576CheA signal transduction histidine kinases; PFAM: response regulator receiver; CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; KEGG: dps:DP2642 related to two-component system sensory/regulatory protein (Che family). (1104 aa)    
Predicted Functional Partners:
Mmc1_0629
PFAM: response regulator receiver; CheW domain protein; KEGG: cps:CPS_1474 chemotaxis protein CheV.
  
 0.998
Mmc1_1805
PFAM: response regulator receiver; CheW domain protein; KEGG: ilo:IL1149 chemotaxis protein CheV.
  
 0.998
Mmc1_3390
PFAM: CheB methylesterase; MCP methyltransferase, CheR-type; KEGG: mbu:Mbur_0399 MCP methyltransferase, CheR-type.
 
 0.997
Mmc1_3577
PFAM: CheW domain protein; KEGG: dps:DP2643 related to purine-binding chemotaxis protein CheW.
 
 0.995
Mmc1_2113
PFAM: CheB methylesterase; MCP methyltransferase, CheR-type; KEGG: cvi:CV1580 probable two-component hybrid sensor-regulator protein.
 
 
 0.994
Mmc1_2112
Cache sensor hybrid histidine kinase; PFAM: response regulator receiver; GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: cvi:CV1579 probable two-component hybrid sensor and regulator.
  
 
0.993
Mmc1_3653
PFAM: CheW domain protein; KEGG: gme:Gmet_2421 CheW protein.
 0.991
Mmc1_1071
PFAM: CheW domain protein; KEGG: dps:DP2643 related to purine-binding chemotaxis protein CheW.
 
 0.990
Mmc1_3204
PFAM: CheW domain protein; KEGG: dsy:DSY2993 hypothetical protein.
 
 0.989
Mmc1_2492
PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; Cache, type 2 domain protein; KEGG: bja:bll7295 hypothetical protein.
 
 0.986
Your Current Organism:
Magnetococcus marinus
NCBI taxonomy Id: 156889
Other names: M. marinus MC-1, Magnetococcus marinus MC-1, Magnetococcus marinus str. MC-1, Magnetococcus marinus strain MC-1, Magnetococcus sp. MC-1
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.