STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mmc1_3584KEGG: gsu:GSU0404 hypothetical protein. (152 aa)    
Predicted Functional Partners:
Mmc1_3585
PFAM: response regulator receiver; KEGG: gsu:GSU0403 chemotaxis protein CheY.
   
  0.860
Mmc1_3583
PFAM: response regulator receiver; KEGG: wsu:WS0619 response regulator.
  
 
  0.833
Mmc1_0631
PFAM: response regulator receiver; KEGG: gsu:GSU1289 chemotaxis protein CheY.
    
  0.730
Mmc1_3210
PFAM: response regulator receiver; KEGG: sat:SYN_00173 response regulator receiver domain.
  
 
 0.680
Mmc1_2284
PFAM: response regulator receiver; KEGG: mag:amb4152 FOG: CheY-like receiver.
     
  0.650
Mmc1_3582
PFAM: MCP methyltransferase, CheR-type; KEGG: pae:PA3348 probable chemotaxis protein methyltransferase.
     
 0.543
Mmc1_1482
CheA signal transduction histidine kinases; PFAM: response regulator receiver; CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Hpt domain protein; KEGG: mag:amb3004 Gliding motility regulatory protein.
   
 
 0.436
Mmc1_1834
CheA signal transduction histidine kinases; PFAM: response regulator receiver; CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Hpt domain protein; KEGG: nmu:Nmul_A0333 CheA signal transduction histidine kinase.
   
 
 0.436
Mmc1_3576
CheA signal transduction histidine kinases; PFAM: response regulator receiver; CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; KEGG: dps:DP2642 related to two-component system sensory/regulatory protein (Che family).
   
 
 0.436
cheB-4
Response regulator receiver modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
       0.421
Your Current Organism:
Magnetococcus marinus
NCBI taxonomy Id: 156889
Other names: M. marinus MC-1, Magnetococcus marinus MC-1, Magnetococcus marinus str. MC-1, Magnetococcus marinus strain MC-1, Magnetococcus sp. MC-1
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