STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mmc1_3585PFAM: response regulator receiver; KEGG: gsu:GSU0403 chemotaxis protein CheY. (119 aa)    
Predicted Functional Partners:
Mmc1_0630
CheA signal transduction histidine kinase; PFAM: CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; KEGG: gsu:GSU1290 chemotaxis protein CheA.
 
 0.994
Mmc1_2285
CheA signal transduction histidine kinases; PFAM: CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; KEGG: aba:Acid345_1524 CheA signal transduction histidine kinases.
 
 0.994
Mmc1_3576
CheA signal transduction histidine kinases; PFAM: response regulator receiver; CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; KEGG: dps:DP2642 related to two-component system sensory/regulatory protein (Che family).
 
 
0.952
Mmc1_3567
Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
  
 
 0.940
Mmc1_3568
Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
  
 
 0.940
Mmc1_3271
KEGG: aba:Acid345_4059 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
  
 
0.925
Mmc1_2283
PFAM: CheC domain protein; KEGG: rpc:RPC_4604 CheC, inhibitor of MCP methylation.
   
 
  0.914
Mmc1_3527
PFAM: CheC domain protein; KEGG: rpc:RPC_4604 CheC, inhibitor of MCP methylation.
   
 
  0.914
Mmc1_3653
PFAM: CheW domain protein; KEGG: gme:Gmet_2421 CheW protein.
 
 0.900
Mmc1_3577
PFAM: CheW domain protein; KEGG: dps:DP2643 related to purine-binding chemotaxis protein CheW.
 
 0.889
Your Current Organism:
Magnetococcus marinus
NCBI taxonomy Id: 156889
Other names: M. marinus MC-1, Magnetococcus marinus MC-1, Magnetococcus marinus str. MC-1, Magnetococcus marinus strain MC-1, Magnetococcus sp. MC-1
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