node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Mmc1_3726 | Mmc1_3728 | Mmc1_3726 | Mmc1_3728 | PFAM: protein of unknown function DUF503; KEGG: det:DET0968 hypothetical protein. | LSU ribosomal protein L7AE; PFAM: protein of unknown function DUF448; KEGG: gsu:GSU1587 ribosomal protein L7Ae family protein. | 0.749 |
Mmc1_3726 | infB | Mmc1_3726 | Mmc1_3727 | PFAM: protein of unknown function DUF503; KEGG: det:DET0968 hypothetical protein. | Bacterial translation initiation factor 2 (bIF-2); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.831 |
Mmc1_3726 | rbfA | Mmc1_3726 | Mmc1_3725 | PFAM: protein of unknown function DUF503; KEGG: det:DET0968 hypothetical protein. | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | 0.915 |
Mmc1_3726 | rimP | Mmc1_3726 | Mmc1_3730 | PFAM: protein of unknown function DUF503; KEGG: det:DET0968 hypothetical protein. | Protein of unknown function DUF150; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | 0.549 |
Mmc1_3726 | rpsO | Mmc1_3726 | Mmc1_3723 | PFAM: protein of unknown function DUF503; KEGG: det:DET0968 hypothetical protein. | SSU ribosomal protein S15P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.708 |
Mmc1_3726 | truB | Mmc1_3726 | Mmc1_3724 | PFAM: protein of unknown function DUF503; KEGG: det:DET0968 hypothetical protein. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.829 |
Mmc1_3728 | Mmc1_3726 | Mmc1_3728 | Mmc1_3726 | LSU ribosomal protein L7AE; PFAM: protein of unknown function DUF448; KEGG: gsu:GSU1587 ribosomal protein L7Ae family protein. | PFAM: protein of unknown function DUF503; KEGG: det:DET0968 hypothetical protein. | 0.749 |
Mmc1_3728 | infB | Mmc1_3728 | Mmc1_3727 | LSU ribosomal protein L7AE; PFAM: protein of unknown function DUF448; KEGG: gsu:GSU1587 ribosomal protein L7Ae family protein. | Bacterial translation initiation factor 2 (bIF-2); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.999 |
Mmc1_3728 | rbfA | Mmc1_3728 | Mmc1_3725 | LSU ribosomal protein L7AE; PFAM: protein of unknown function DUF448; KEGG: gsu:GSU1587 ribosomal protein L7Ae family protein. | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | 0.841 |
Mmc1_3728 | rimP | Mmc1_3728 | Mmc1_3730 | LSU ribosomal protein L7AE; PFAM: protein of unknown function DUF448; KEGG: gsu:GSU1587 ribosomal protein L7Ae family protein. | Protein of unknown function DUF150; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | 0.999 |
Mmc1_3728 | rplR | Mmc1_3728 | Mmc1_0863 | LSU ribosomal protein L7AE; PFAM: protein of unknown function DUF448; KEGG: gsu:GSU1587 ribosomal protein L7Ae family protein. | LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.999 |
Mmc1_3728 | rpmD | Mmc1_3728 | Mmc1_0865 | LSU ribosomal protein L7AE; PFAM: protein of unknown function DUF448; KEGG: gsu:GSU1587 ribosomal protein L7Ae family protein. | PFAM: ribosomal protein L30; KEGG: lsl:LSL_1417 LSU ribosomal protein L30P. | 0.999 |
Mmc1_3728 | rpsE | Mmc1_3728 | Mmc1_0864 | LSU ribosomal protein L7AE; PFAM: protein of unknown function DUF448; KEGG: gsu:GSU1587 ribosomal protein L7Ae family protein. | SSU ribosomal protein S5P; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. | 0.997 |
Mmc1_3728 | rpsO | Mmc1_3728 | Mmc1_3723 | LSU ribosomal protein L7AE; PFAM: protein of unknown function DUF448; KEGG: gsu:GSU1587 ribosomal protein L7Ae family protein. | SSU ribosomal protein S15P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.999 |
Mmc1_3728 | rpsQ | Mmc1_3728 | Mmc1_0856 | LSU ribosomal protein L7AE; PFAM: protein of unknown function DUF448; KEGG: gsu:GSU1587 ribosomal protein L7Ae family protein. | SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.999 |
Mmc1_3728 | truB | Mmc1_3728 | Mmc1_3724 | LSU ribosomal protein L7AE; PFAM: protein of unknown function DUF448; KEGG: gsu:GSU1587 ribosomal protein L7Ae family protein. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.999 |
infB | Mmc1_3726 | Mmc1_3727 | Mmc1_3726 | Bacterial translation initiation factor 2 (bIF-2); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | PFAM: protein of unknown function DUF503; KEGG: det:DET0968 hypothetical protein. | 0.831 |
infB | Mmc1_3728 | Mmc1_3727 | Mmc1_3728 | Bacterial translation initiation factor 2 (bIF-2); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | LSU ribosomal protein L7AE; PFAM: protein of unknown function DUF448; KEGG: gsu:GSU1587 ribosomal protein L7Ae family protein. | 0.999 |
infB | rbfA | Mmc1_3727 | Mmc1_3725 | Bacterial translation initiation factor 2 (bIF-2); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | 0.985 |
infB | rimP | Mmc1_3727 | Mmc1_3730 | Bacterial translation initiation factor 2 (bIF-2); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Protein of unknown function DUF150; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | 0.949 |