Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEB50479.1 | SEB80679.1 | SAMN04489745_0418 | SAMN04489745_1301 | Hypothetical protein. | LPXTG-motif cell wall anchor domain-containing protein. | 0.625 |
SEB50479.1 | SEC45330.1 | SAMN04489745_0418 | SAMN04489745_2908 | Hypothetical protein. | Hypothetical protein. | 0.975 |
SEB80679.1 | SEB50479.1 | SAMN04489745_1301 | SAMN04489745_0418 | LPXTG-motif cell wall anchor domain-containing protein. | Hypothetical protein. | 0.625 |
SEB80679.1 | SEB87199.1 | SAMN04489745_1301 | SAMN04489745_1472 | LPXTG-motif cell wall anchor domain-containing protein. | FHA domain-containing protein. | 0.573 |
SEB80679.1 | SEC11188.1 | SAMN04489745_1301 | SAMN04489745_2100 | LPXTG-motif cell wall anchor domain-containing protein. | Hypothetical protein. | 0.586 |
SEB80679.1 | SEC19924.1 | SAMN04489745_1301 | SAMN04489745_2310 | LPXTG-motif cell wall anchor domain-containing protein. | Serine protease, subtilisin family; Belongs to the peptidase S8 family. | 0.615 |
SEB80679.1 | SEC22007.1 | SAMN04489745_1301 | SAMN04489745_2359 | LPXTG-motif cell wall anchor domain-containing protein. | Tricorn protease; Degrades oligopeptides; Belongs to the peptidase S41B family. | 0.602 |
SEB80679.1 | SEC33459.1 | SAMN04489745_1301 | SAMN04489745_2609 | LPXTG-motif cell wall anchor domain-containing protein. | DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family. | 0.573 |
SEB80679.1 | SEC39883.1 | SAMN04489745_1301 | SAMN04489745_2769 | LPXTG-motif cell wall anchor domain-containing protein. | DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family. | 0.573 |
SEB80679.1 | SEC45330.1 | SAMN04489745_1301 | SAMN04489745_2908 | LPXTG-motif cell wall anchor domain-containing protein. | Hypothetical protein. | 0.667 |
SEB80679.1 | SEC46294.1 | SAMN04489745_1301 | SAMN04489745_2933 | LPXTG-motif cell wall anchor domain-containing protein. | Serine protease, subtilisin family; Belongs to the peptidase S8 family. | 0.556 |
SEB80679.1 | acpP | SAMN04489745_1301 | SAMN04489745_1714 | LPXTG-motif cell wall anchor domain-containing protein. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | 0.620 |
SEB87199.1 | SEB80679.1 | SAMN04489745_1472 | SAMN04489745_1301 | FHA domain-containing protein. | LPXTG-motif cell wall anchor domain-containing protein. | 0.573 |
SEB87199.1 | SEC19924.1 | SAMN04489745_1472 | SAMN04489745_2310 | FHA domain-containing protein. | Serine protease, subtilisin family; Belongs to the peptidase S8 family. | 0.467 |
SEB87199.1 | SEC46294.1 | SAMN04489745_1472 | SAMN04489745_2933 | FHA domain-containing protein. | Serine protease, subtilisin family; Belongs to the peptidase S8 family. | 0.467 |
SEC11188.1 | SEB80679.1 | SAMN04489745_2100 | SAMN04489745_1301 | Hypothetical protein. | LPXTG-motif cell wall anchor domain-containing protein. | 0.586 |
SEC19924.1 | SEB80679.1 | SAMN04489745_2310 | SAMN04489745_1301 | Serine protease, subtilisin family; Belongs to the peptidase S8 family. | LPXTG-motif cell wall anchor domain-containing protein. | 0.615 |
SEC19924.1 | SEB87199.1 | SAMN04489745_2310 | SAMN04489745_1472 | Serine protease, subtilisin family; Belongs to the peptidase S8 family. | FHA domain-containing protein. | 0.467 |
SEC19924.1 | SEC33459.1 | SAMN04489745_2310 | SAMN04489745_2609 | Serine protease, subtilisin family; Belongs to the peptidase S8 family. | DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family. | 0.425 |
SEC19924.1 | SEC39883.1 | SAMN04489745_2310 | SAMN04489745_2769 | Serine protease, subtilisin family; Belongs to the peptidase S8 family. | DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family. | 0.467 |
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