STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ74408.1Response regulator receiver domain-containing protein. (120 aa)    
Predicted Functional Partners:
SHJ46743.1
GAF domain-containing protein.
 
 0.999
SHJ53193.1
Signal transduction histidine kinase.
  
 0.999
SHJ60856.1
Signal transduction histidine kinase.
 0.999
SHJ43237.1
Methyl-accepting chemotaxis protein.
  
 0.999
SHJ69974.1
Signal transduction histidine kinase.
 0.999
SHK05015.1
His Kinase A (phospho-acceptor) domain-containing protein.
 0.999
SHK47634.1
Response regulator receiver domain-containing protein.
 
 0.999
SHK48785.1
Multi-sensor hybrid histidine kinase.
 
 0.999
SHK87623.1
Signal transduction histidine kinase.
 0.999
SHK97732.1
PAS domain S-box-containing protein.
 0.999
Your Current Organism:
Reichenbachiella agariperforans
NCBI taxonomy Id: 156994
Other names: DSM 26134, JCM 11238, KMM 3525, NBRC 16625, R. agariperforans, Reichenbachia agariperforans, Reichenbachia agariperforans Nedashkovskaya et al. 2003, Reichenbachiella agariperforans (Nedashkovskaya et al. 2003) Nedashkovskaya et al. 2005 emend. Cha et al. 2011
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