Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHJ46237.1 | SHJ88747.1 | SAMN04488028_101198 | SAMN04488028_10221 | Thioredoxin. | Protein-tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | 0.650 |
SHJ46237.1 | SHJ91184.1 | SAMN04488028_101198 | SAMN04488028_102117 | Thioredoxin. | Glyceraldehyde-3-phosphate dehydrogenase (NAD+); Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.720 |
SHJ46237.1 | SHJ93259.1 | SAMN04488028_101198 | SAMN04488028_102196 | Thioredoxin. | Thioredoxin reductase (NADPH). | 0.864 |
SHJ46237.1 | SHK16437.1 | SAMN04488028_101198 | SAMN04488028_103212 | Thioredoxin. | Arsenate reductase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | 0.650 |
SHJ46237.1 | SHK50723.1 | SAMN04488028_101198 | SAMN04488028_105243 | Thioredoxin. | Thioredoxin reductase (NADPH). | 0.867 |
SHJ46237.1 | SHK56157.1 | SAMN04488028_101198 | SAMN04488028_10636 | Thioredoxin. | Hypothetical protein. | 0.650 |
SHJ46237.1 | SHK56808.1 | SAMN04488028_101198 | SAMN04488028_10659 | Thioredoxin. | Glutamate synthase (NADPH/NADH) large chain. | 0.739 |
SHJ46237.1 | SHK81838.1 | SAMN04488028_101198 | SAMN04488028_10985 | Thioredoxin. | Thioredoxin reductase. | 0.819 |
SHJ46237.1 | fusA | SAMN04488028_101198 | SAMN04488028_104250 | Thioredoxin. | Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily. | 0.786 |
SHJ46237.1 | ribBA | SAMN04488028_101198 | SAMN04488028_105167 | Thioredoxin. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.712 |
SHJ88747.1 | SHJ46237.1 | SAMN04488028_10221 | SAMN04488028_101198 | Protein-tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | Thioredoxin. | 0.650 |
SHJ91184.1 | SHJ46237.1 | SAMN04488028_102117 | SAMN04488028_101198 | Glyceraldehyde-3-phosphate dehydrogenase (NAD+); Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Thioredoxin. | 0.720 |
SHJ91184.1 | SHK56808.1 | SAMN04488028_102117 | SAMN04488028_10659 | Glyceraldehyde-3-phosphate dehydrogenase (NAD+); Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Glutamate synthase (NADPH/NADH) large chain. | 0.820 |
SHJ91184.1 | fusA | SAMN04488028_102117 | SAMN04488028_104250 | Glyceraldehyde-3-phosphate dehydrogenase (NAD+); Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily. | 0.625 |
SHJ91184.1 | ribBA | SAMN04488028_102117 | SAMN04488028_105167 | Glyceraldehyde-3-phosphate dehydrogenase (NAD+); Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.484 |
SHJ93259.1 | SHJ46237.1 | SAMN04488028_102196 | SAMN04488028_101198 | Thioredoxin reductase (NADPH). | Thioredoxin. | 0.864 |
SHJ93259.1 | SHK56808.1 | SAMN04488028_102196 | SAMN04488028_10659 | Thioredoxin reductase (NADPH). | Glutamate synthase (NADPH/NADH) large chain. | 0.839 |
SHK16437.1 | SHJ46237.1 | SAMN04488028_103212 | SAMN04488028_101198 | Arsenate reductase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | Thioredoxin. | 0.650 |
SHK50723.1 | SHJ46237.1 | SAMN04488028_105243 | SAMN04488028_101198 | Thioredoxin reductase (NADPH). | Thioredoxin. | 0.867 |
SHK50723.1 | SHK56808.1 | SAMN04488028_105243 | SAMN04488028_10659 | Thioredoxin reductase (NADPH). | Glutamate synthase (NADPH/NADH) large chain. | 0.839 |
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