Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHJ46653.1 | SHJ46743.1 | SAMN04488028_101212 | SAMN04488028_101215 | WD domain-containing protein, G-beta repeat-containing protein. | GAF domain-containing protein. | 0.962 |
SHJ46653.1 | SHJ51505.1 | SAMN04488028_101212 | SAMN04488028_101363 | WD domain-containing protein, G-beta repeat-containing protein. | Tetratricopeptide repeat-containing protein. | 0.779 |
SHJ46653.1 | SHJ71004.1 | SAMN04488028_101212 | SAMN04488028_101975 | WD domain-containing protein, G-beta repeat-containing protein. | Ankyrin repeat. | 0.912 |
SHJ46653.1 | SHJ98857.1 | SAMN04488028_101212 | SAMN04488028_102395 | WD domain-containing protein, G-beta repeat-containing protein. | Tetratricopeptide repeat-containing protein. | 0.975 |
SHJ46653.1 | SHK15493.1 | SAMN04488028_101212 | SAMN04488028_103179 | WD domain-containing protein, G-beta repeat-containing protein. | Tfp pilus assembly protein PilF. | 0.842 |
SHJ46653.1 | SHK48785.1 | SAMN04488028_101212 | SAMN04488028_105174 | WD domain-containing protein, G-beta repeat-containing protein. | Multi-sensor hybrid histidine kinase. | 0.933 |
SHJ46653.1 | SHK93028.1 | SAMN04488028_101212 | SAMN04488028_11227 | WD domain-containing protein, G-beta repeat-containing protein. | WD40 repeat. | 0.474 |
SHJ46653.1 | rpoA | SAMN04488028_101212 | SAMN04488028_104223 | WD domain-containing protein, G-beta repeat-containing protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.647 |
SHJ46743.1 | SHJ46653.1 | SAMN04488028_101215 | SAMN04488028_101212 | GAF domain-containing protein. | WD domain-containing protein, G-beta repeat-containing protein. | 0.962 |
SHJ46743.1 | SHJ51505.1 | SAMN04488028_101215 | SAMN04488028_101363 | GAF domain-containing protein. | Tetratricopeptide repeat-containing protein. | 0.830 |
SHJ46743.1 | SHJ98857.1 | SAMN04488028_101215 | SAMN04488028_102395 | GAF domain-containing protein. | Tetratricopeptide repeat-containing protein. | 0.957 |
SHJ46743.1 | SHK15493.1 | SAMN04488028_101215 | SAMN04488028_103179 | GAF domain-containing protein. | Tfp pilus assembly protein PilF. | 0.830 |
SHJ46743.1 | SHK48785.1 | SAMN04488028_101215 | SAMN04488028_105174 | GAF domain-containing protein. | Multi-sensor hybrid histidine kinase. | 0.999 |
SHJ46743.1 | SHK93028.1 | SAMN04488028_101215 | SAMN04488028_11227 | GAF domain-containing protein. | WD40 repeat. | 0.671 |
SHJ46743.1 | dnaK | SAMN04488028_101215 | SAMN04488028_101622 | GAF domain-containing protein. | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.487 |
SHJ46743.1 | ribBA | SAMN04488028_101215 | SAMN04488028_105167 | GAF domain-containing protein. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.949 |
SHJ51505.1 | SHJ46653.1 | SAMN04488028_101363 | SAMN04488028_101212 | Tetratricopeptide repeat-containing protein. | WD domain-containing protein, G-beta repeat-containing protein. | 0.779 |
SHJ51505.1 | SHJ46743.1 | SAMN04488028_101363 | SAMN04488028_101215 | Tetratricopeptide repeat-containing protein. | GAF domain-containing protein. | 0.830 |
SHJ51505.1 | SHJ71004.1 | SAMN04488028_101363 | SAMN04488028_101975 | Tetratricopeptide repeat-containing protein. | Ankyrin repeat. | 0.797 |
SHJ51505.1 | SHJ98857.1 | SAMN04488028_101363 | SAMN04488028_102395 | Tetratricopeptide repeat-containing protein. | Tetratricopeptide repeat-containing protein. | 0.800 |
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