STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ52293.1Methyl-accepting chemotaxis protein. (510 aa)    
Predicted Functional Partners:
SHK48785.1
Multi-sensor hybrid histidine kinase.
  
 0.986
SHJ46743.1
GAF domain-containing protein.
  
 0.985
SHJ59186.1
Two-component system, chemotaxis family, sensor kinase CheA.
 
 0.971
SHK50503.1
Two-component system, chemotaxis family, sensor kinase CheA.
 
 0.971
SHK50474.1
Purine-binding chemotaxis protein CheW.
 
  0.968
SHJ55819.1
Adenylate cyclase, class 3.
 
 0.952
SHK50455.1
Purine-binding chemotaxis protein CheW.
  
  0.952
SHJ59259.1
Chemotaxis signal transduction protein.
  
  0.951
SHJ59365.1
Purine-binding chemotaxis protein CheW.
  
  0.951
SHK50402.1
Chemotaxis protein methyltransferase CheR.
 0.930
Your Current Organism:
Reichenbachiella agariperforans
NCBI taxonomy Id: 156994
Other names: DSM 26134, JCM 11238, KMM 3525, NBRC 16625, R. agariperforans, Reichenbachia agariperforans, Reichenbachia agariperforans Nedashkovskaya et al. 2003, Reichenbachiella agariperforans (Nedashkovskaya et al. 2003) Nedashkovskaya et al. 2005 emend. Cha et al. 2011
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