Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHJ96738.1 | SHJ96763.1 | SAMN04488028_102313 | SAMN04488028_102314 | DNA uptake protein ComE. | Hypothetical protein. | 0.713 |
SHJ96738.1 | SHJ96824.1 | SAMN04488028_102313 | SAMN04488028_102316 | DNA uptake protein ComE. | Hypothetical protein. | 0.478 |
SHJ96738.1 | prfA | SAMN04488028_102313 | SAMN04488028_102315 | DNA uptake protein ComE. | Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. | 0.676 |
SHJ96763.1 | SHJ96738.1 | SAMN04488028_102314 | SAMN04488028_102313 | Hypothetical protein. | DNA uptake protein ComE. | 0.713 |
SHJ96763.1 | SHJ96824.1 | SAMN04488028_102314 | SAMN04488028_102316 | Hypothetical protein. | Hypothetical protein. | 0.541 |
SHJ96763.1 | prfA | SAMN04488028_102314 | SAMN04488028_102315 | Hypothetical protein. | Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. | 0.798 |
SHJ96824.1 | SHJ96738.1 | SAMN04488028_102316 | SAMN04488028_102313 | Hypothetical protein. | DNA uptake protein ComE. | 0.478 |
SHJ96824.1 | SHJ96763.1 | SAMN04488028_102316 | SAMN04488028_102314 | Hypothetical protein. | Hypothetical protein. | 0.541 |
SHJ96824.1 | prfA | SAMN04488028_102316 | SAMN04488028_102315 | Hypothetical protein. | Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. | 0.541 |
prfA | SHJ96738.1 | SAMN04488028_102315 | SAMN04488028_102313 | Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. | DNA uptake protein ComE. | 0.676 |
prfA | SHJ96763.1 | SAMN04488028_102315 | SAMN04488028_102314 | Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. | Hypothetical protein. | 0.798 |
prfA | SHJ96824.1 | SAMN04488028_102315 | SAMN04488028_102316 | Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. | Hypothetical protein. | 0.541 |