STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK20742.1Putative bacilliredoxin, YphP/YqiW family; Belongs to the UPF0403 family. (138 aa)    
Predicted Functional Partners:
bshC
Bacillithiol biosynthesis cysteine-adding enzyme BshC; Belongs to the BshC family.
  
   
 0.782
SHK73373.1
N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA.
  
     0.768
SHK86337.1
Bacillithiol system protein YtxJ.
  
   
 0.707
SHJ93259.1
Thioredoxin reductase (NADPH).
  
   
 0.696
SHK50790.1
Bacillithiol biosynthesis deacetylase BshB1.
  
     0.672
SHK94341.1
Uncharacterized damage-inducible protein DinB (forms a four-helix bundle).
  
     0.653
SHK20773.1
FeS assembly SUF system protein.
  
    0.639
SHJ93960.1
Hypothetical protein.
  
     0.620
SHK20798.1
Cysteine desulfuration protein SufE.
       0.620
SHK20874.1
Iron-regulated ABC transporter ATPase subunit SufC.
  
    0.620
Your Current Organism:
Reichenbachiella agariperforans
NCBI taxonomy Id: 156994
Other names: DSM 26134, JCM 11238, KMM 3525, NBRC 16625, R. agariperforans, Reichenbachia agariperforans, Reichenbachia agariperforans Nedashkovskaya et al. 2003, Reichenbachiella agariperforans (Nedashkovskaya et al. 2003) Nedashkovskaya et al. 2005 emend. Cha et al. 2011
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