Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHK50084.1 | SHK50106.1 | SAMN04488028_105219 | SAMN04488028_105220 | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | DoxX-like family protein. | 0.649 |
SHK50084.1 | SHK50131.1 | SAMN04488028_105219 | SAMN04488028_105221 | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | Polyisoprenoid-binding protein YceI; Belongs to the UPF0312 family. | 0.429 |
SHK50084.1 | SHK50159.1 | SAMN04488028_105219 | SAMN04488028_105222 | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | Hypothetical protein. | 0.429 |
SHK50084.1 | SHK50181.1 | SAMN04488028_105219 | SAMN04488028_105223 | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | NAD(P)H dehydrogenase (quinone). | 0.429 |
SHK50106.1 | SHK50084.1 | SAMN04488028_105220 | SAMN04488028_105219 | DoxX-like family protein. | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | 0.649 |
SHK50106.1 | SHK50131.1 | SAMN04488028_105220 | SAMN04488028_105221 | DoxX-like family protein. | Polyisoprenoid-binding protein YceI; Belongs to the UPF0312 family. | 0.570 |
SHK50106.1 | SHK50159.1 | SAMN04488028_105220 | SAMN04488028_105222 | DoxX-like family protein. | Hypothetical protein. | 0.570 |
SHK50106.1 | SHK50181.1 | SAMN04488028_105220 | SAMN04488028_105223 | DoxX-like family protein. | NAD(P)H dehydrogenase (quinone). | 0.625 |
SHK50106.1 | SHK50234.1 | SAMN04488028_105220 | SAMN04488028_105225 | DoxX-like family protein. | Catechol 2,3-dioxygenase. | 0.545 |
SHK50131.1 | SHK50084.1 | SAMN04488028_105221 | SAMN04488028_105219 | Polyisoprenoid-binding protein YceI; Belongs to the UPF0312 family. | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | 0.429 |
SHK50131.1 | SHK50106.1 | SAMN04488028_105221 | SAMN04488028_105220 | Polyisoprenoid-binding protein YceI; Belongs to the UPF0312 family. | DoxX-like family protein. | 0.570 |
SHK50131.1 | SHK50159.1 | SAMN04488028_105221 | SAMN04488028_105222 | Polyisoprenoid-binding protein YceI; Belongs to the UPF0312 family. | Hypothetical protein. | 0.773 |
SHK50131.1 | SHK50181.1 | SAMN04488028_105221 | SAMN04488028_105223 | Polyisoprenoid-binding protein YceI; Belongs to the UPF0312 family. | NAD(P)H dehydrogenase (quinone). | 0.784 |
SHK50131.1 | SHK50206.1 | SAMN04488028_105221 | SAMN04488028_105224 | Polyisoprenoid-binding protein YceI; Belongs to the UPF0312 family. | 4Fe-4S dicluster domain-containing protein. | 0.459 |
SHK50131.1 | SHK50234.1 | SAMN04488028_105221 | SAMN04488028_105225 | Polyisoprenoid-binding protein YceI; Belongs to the UPF0312 family. | Catechol 2,3-dioxygenase. | 0.424 |
SHK50159.1 | SHK50084.1 | SAMN04488028_105222 | SAMN04488028_105219 | Hypothetical protein. | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | 0.429 |
SHK50159.1 | SHK50106.1 | SAMN04488028_105222 | SAMN04488028_105220 | Hypothetical protein. | DoxX-like family protein. | 0.570 |
SHK50159.1 | SHK50131.1 | SAMN04488028_105222 | SAMN04488028_105221 | Hypothetical protein. | Polyisoprenoid-binding protein YceI; Belongs to the UPF0312 family. | 0.773 |
SHK50159.1 | SHK50181.1 | SAMN04488028_105222 | SAMN04488028_105223 | Hypothetical protein. | NAD(P)H dehydrogenase (quinone). | 0.773 |
SHK50159.1 | SHK50206.1 | SAMN04488028_105222 | SAMN04488028_105224 | Hypothetical protein. | 4Fe-4S dicluster domain-containing protein. | 0.459 |
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