Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHK43557.1 | SHK43590.1 | SAMN04488028_1054 | SAMN04488028_1055 | Hypothetical protein. | L-ascorbate metabolism protein UlaG, beta-lactamase superfamily. | 0.773 |
SHK43557.1 | SHK43623.1 | SAMN04488028_1054 | SAMN04488028_1056 | Hypothetical protein. | Hypothetical protein. | 0.615 |
SHK43557.1 | SHK43657.1 | SAMN04488028_1054 | SAMN04488028_1057 | Hypothetical protein. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.443 |
SHK43590.1 | SHK43557.1 | SAMN04488028_1055 | SAMN04488028_1054 | L-ascorbate metabolism protein UlaG, beta-lactamase superfamily. | Hypothetical protein. | 0.773 |
SHK43590.1 | SHK43623.1 | SAMN04488028_1055 | SAMN04488028_1056 | L-ascorbate metabolism protein UlaG, beta-lactamase superfamily. | Hypothetical protein. | 0.615 |
SHK43590.1 | SHK43657.1 | SAMN04488028_1055 | SAMN04488028_1057 | L-ascorbate metabolism protein UlaG, beta-lactamase superfamily. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.443 |
SHK43623.1 | SHK43557.1 | SAMN04488028_1056 | SAMN04488028_1054 | Hypothetical protein. | Hypothetical protein. | 0.615 |
SHK43623.1 | SHK43590.1 | SAMN04488028_1056 | SAMN04488028_1055 | Hypothetical protein. | L-ascorbate metabolism protein UlaG, beta-lactamase superfamily. | 0.615 |
SHK43623.1 | SHK43657.1 | SAMN04488028_1056 | SAMN04488028_1057 | Hypothetical protein. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.545 |
SHK43657.1 | SHK43557.1 | SAMN04488028_1057 | SAMN04488028_1054 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | Hypothetical protein. | 0.443 |
SHK43657.1 | SHK43590.1 | SAMN04488028_1057 | SAMN04488028_1055 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | L-ascorbate metabolism protein UlaG, beta-lactamase superfamily. | 0.443 |
SHK43657.1 | SHK43623.1 | SAMN04488028_1057 | SAMN04488028_1056 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | Hypothetical protein. | 0.545 |