STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK74909.1Glycosyltransferase involved in cell wall bisynthesis. (318 aa)    
Predicted Functional Partners:
SHK61740.1
Glycosyltransferase involved in cell wall bisynthesis.
  
 
  0.757
SHJ92211.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
  
  
  0.613
SHK11162.1
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
   
 0.599
SHK02146.1
Trehalose 6-phosphate synthase/phosphatase.
   
 
 0.575
SHJ99166.1
Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase.
 
  
 0.560
SHJ69177.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
  
 
  0.529
SHK88845.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    
0.528
SHK74936.1
Capsule assembly protein Wzi.
       0.495
SHK74966.1
Hypothetical protein.
       0.495
SHK60320.1
Capsular exopolysaccharide family.
 
  
 0.490
Your Current Organism:
Reichenbachiella agariperforans
NCBI taxonomy Id: 156994
Other names: DSM 26134, JCM 11238, KMM 3525, NBRC 16625, R. agariperforans, Reichenbachia agariperforans, Reichenbachia agariperforans Nedashkovskaya et al. 2003, Reichenbachiella agariperforans (Nedashkovskaya et al. 2003) Nedashkovskaya et al. 2005 emend. Cha et al. 2011
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