Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHJ43156.1 | SHJ65202.1 | SAMN04488028_10191 | SAMN04488028_101792 | Peroxiredoxin. | Dihydrolipoamide dehydrogenase. | 0.428 |
SHJ43156.1 | SHK19918.1 | SAMN04488028_10191 | SAMN04488028_103338 | Peroxiredoxin. | Dihydrolipoamide dehydrogenase. | 0.428 |
SHJ43156.1 | SHK86183.1 | SAMN04488028_10191 | SAMN04488028_11039 | Peroxiredoxin. | Thiol-disulfide isomerase or thioredoxin. | 0.768 |
SHJ47529.1 | SHK86183.1 | SAMN04488028_101237 | SAMN04488028_11039 | Protein of unknown function. | Thiol-disulfide isomerase or thioredoxin. | 0.754 |
SHJ65202.1 | SHJ43156.1 | SAMN04488028_101792 | SAMN04488028_10191 | Dihydrolipoamide dehydrogenase. | Peroxiredoxin. | 0.428 |
SHJ65202.1 | SHJ88808.1 | SAMN04488028_101792 | SAMN04488028_10224 | Dihydrolipoamide dehydrogenase. | Peroxiredoxin (alkyl hydroperoxide reductase subunit C). | 0.428 |
SHJ65202.1 | SHK19918.1 | SAMN04488028_101792 | SAMN04488028_103338 | Dihydrolipoamide dehydrogenase. | Dihydrolipoamide dehydrogenase. | 0.727 |
SHJ65202.1 | SHK86183.1 | SAMN04488028_101792 | SAMN04488028_11039 | Dihydrolipoamide dehydrogenase. | Thiol-disulfide isomerase or thioredoxin. | 0.738 |
SHJ88808.1 | SHJ65202.1 | SAMN04488028_10224 | SAMN04488028_101792 | Peroxiredoxin (alkyl hydroperoxide reductase subunit C). | Dihydrolipoamide dehydrogenase. | 0.428 |
SHJ88808.1 | SHK19918.1 | SAMN04488028_10224 | SAMN04488028_103338 | Peroxiredoxin (alkyl hydroperoxide reductase subunit C). | Dihydrolipoamide dehydrogenase. | 0.428 |
SHJ88808.1 | SHK86183.1 | SAMN04488028_10224 | SAMN04488028_11039 | Peroxiredoxin (alkyl hydroperoxide reductase subunit C). | Thiol-disulfide isomerase or thioredoxin. | 0.768 |
SHK19918.1 | SHJ43156.1 | SAMN04488028_103338 | SAMN04488028_10191 | Dihydrolipoamide dehydrogenase. | Peroxiredoxin. | 0.428 |
SHK19918.1 | SHJ65202.1 | SAMN04488028_103338 | SAMN04488028_101792 | Dihydrolipoamide dehydrogenase. | Dihydrolipoamide dehydrogenase. | 0.727 |
SHK19918.1 | SHJ88808.1 | SAMN04488028_103338 | SAMN04488028_10224 | Dihydrolipoamide dehydrogenase. | Peroxiredoxin (alkyl hydroperoxide reductase subunit C). | 0.428 |
SHK19918.1 | SHK86183.1 | SAMN04488028_103338 | SAMN04488028_11039 | Dihydrolipoamide dehydrogenase. | Thiol-disulfide isomerase or thioredoxin. | 0.738 |
SHK31371.1 | SHK86183.1 | SAMN04488028_104160 | SAMN04488028_11039 | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Thiol-disulfide isomerase or thioredoxin. | 0.765 |
SHK61476.1 | SHK86183.1 | SAMN04488028_106216 | SAMN04488028_11039 | Thiol:disulfide interchange protein DsbD. | Thiol-disulfide isomerase or thioredoxin. | 0.832 |
SHK61476.1 | msrA | SAMN04488028_106216 | SAMN04488028_101556 | Thiol:disulfide interchange protein DsbD. | Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.893 |
SHK86183.1 | SHJ43156.1 | SAMN04488028_11039 | SAMN04488028_10191 | Thiol-disulfide isomerase or thioredoxin. | Peroxiredoxin. | 0.768 |
SHK86183.1 | SHJ47529.1 | SAMN04488028_11039 | SAMN04488028_101237 | Thiol-disulfide isomerase or thioredoxin. | Protein of unknown function. | 0.754 |
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