STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002090055_01913Unannotated protein. (131 aa)    
Predicted Functional Partners:
GCA_002090055_00078
Unannotated protein.
    
 0.883
GCA_002090055_00063
Unannotated protein.
    
  0.737
GCA_002090055_01297
Unannotated protein.
    
  0.737
GCA_002090055_01760
Unannotated protein.
    
 0.689
GCA_002090055_01912
Unannotated protein.
 
     0.656
GCA_002090055_01266
Unannotated protein.
   
   0.610
GCA_002090055_01752
Unannotated protein.
   
   0.610
GCA_002090055_00987
Unannotated protein.
  
   0.567
GCA_002090055_00677
Unannotated protein.
    
 0.562
GCA_002090055_01969
Unannotated protein.
    
   0.561
Your Current Organism:
Demequina sp. NBRC110051
NCBI taxonomy Id: 1570340
Other names: D. sp. NBRC 110051, Demequina sp. NBRC 110051
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.