STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002090155_02428Unannotated protein. (401 aa)    
Predicted Functional Partners:
GCA_002090155_02424
Unannotated protein.
 0.991
GCA_002090155_02425
Unannotated protein.
 0.990
GCA_002090155_00261
Unannotated protein.
 0.974
GCA_002090155_02429
Unannotated protein.
 
   
 0.965
GCA_002090155_02426
Unannotated protein.
 
 
 0.940
GCA_002090155_02427
Unannotated protein.
 
  
 0.935
GCA_002090155_02430
Unannotated protein.
 
   
 0.921
GCA_002090155_01287
Unannotated protein.
 
 0.907
GCA_002090155_01506
Unannotated protein.
 
 0.897
GCA_002090155_00909
Unannotated protein.
    
  0.763
Your Current Organism:
Demequina sp. NBRC110056
NCBI taxonomy Id: 1570345
Other names: D. sp. NBRC 110056, Demequina sp. NBRC 110056
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.