STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
walRTranscriptional regulatory protein WalR. (427 aa)    
Predicted Functional Partners:
barA_1
Signal transduction histidine-protein kinase BarA.
 0.999
barA_2
Signal transduction histidine-protein kinase BarA.
 
0.999
RA2_01775
Putative anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family.
 
 0.999
RA2_01973
Blue-light-activated histidine kinase 1.
  
 0.999
arcB
Aerobic respiration control sensor protein ArcB.
0.999
RA2_02829
Hpt domain protein.
 
 0.999
kinB
Alginate biosynthesis sensor protein KinB.
 
 0.999
RA2_00501
Blue-light-activated protein.
 
 0.997
btrW
Serine/threonine-protein kinase BtrW.
 
 0.997
RA2_03672
Heme NO binding protein.
 
  
 0.994
Your Current Organism:
Roseovarius sp. A2
NCBI taxonomy Id: 1570360
Other names: R. sp. A-2, Roseovarius sp. A-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.