Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRE_LOCUS715Uncharacterized protein. (60 aa)    
Predicted Functional Partners:
TRE_LOCUS7059
Aldedh domain-containing protein.
  
 
 0.994
A0A183W3T1
AA_kinase domain-containing protein.
  
 
 0.994
A0A183W3Z2
Uncharacterized protein.
  
 0.994
A0A183WYD8
Aldedh domain-containing protein.
  
 
 0.976
TRE_LOCUS21688
Uncharacterized protein.
    
 0.971
TRE_LOCUS10836
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
   
 0.966
TRE_LOCUS17955
Uncharacterized protein.
   
 0.966
A0A183W7A3
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
  
 
 0.962
A0A183X838
Aldedh domain-containing protein.
  
 
 0.962
TRE_LOCUS20854
Aldedh domain-containing protein.
  
 
 0.962
Your Current Organism:
Trichobilharzia regenti
NCBI taxonomy Id: 157069
Other names: T. regenti, bird nasal schistosome
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